DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ScpX and dhs-6

DIOPT Version :9

Sequence 1:NP_524715.2 Gene:ScpX / 44183 FlyBaseID:FBgn0015808 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001021972.1 Gene:dhs-6 / 3565470 WormBaseID:WBGene00000970 Length:418 Species:Caenorhabditis elegans


Alignment Length:337 Identity:69/337 - (20%)
Similarity:105/337 - (31%) Gaps:112/337 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 GSGAAILASEAFVRRHGLEKQ------AVEIVGMEMASDPASTFADKSLMKIAGTDMTRLATQRL 280
            |....:|......|.||:...      |:....|||.||....         ||:....:.....
 Worm   173 GMSMCVLGQHEEFRPHGIAVNALWPLTAIWTAAMEMLSDKGGE---------AGSRKPSIMADAA 228

  Fly   281 FAKSGYKPQDVQVVELHDCFSANELITYEALGLCGEGNAGE-------------FIDAGDNTYGG 332
            :|......:|         |:.|..|..:.|...|..:...             ||.||  ||..
 Worm   229 YAVLSKNSKD---------FTGNFCIDEDILKAEGVTDFDRYACVPDAPLMPDFFIPAG--TYDH 282

  Fly   333 KFVVNPSGGLISKGHPLGATGLAQCAELCWQLRGLAEKRQVPNAQLALQHNLGLGGAVVVALYRL 397
            ||   .||..|.|.:.....|:.:           .|.:|:                        
 Worm   283 KF---SSGAQIGKKNKTHEAGVVE-----------EEIKQI------------------------ 309

  Fly   398 GFPAANSVVRNLTAAGKAATSEDGFKVAPLLKLLEQAMQEDKDNLIEKVRAIYGFKVNNGPNGQT 462
             |.:|.   |.|.|                             ::::|...:|.|.:.:......
 Worm   310 -FTSAK---RLLNA-----------------------------DIVKKTGFVYEFLLKDPTTKSE 341

  Fly   463 GFWVIDAKQGKGKII-FNGTQKCDVTFIISDDDVFELLTGKLPPQKAFFQGKIKIQGNMGFAMKL 526
            ....:|.|.|:|.:. ...:.|.||.|.::.:....|.||||.|..|....|::|.|:|..||||
 Worm   342 RIITLDLKNGEGALTDKKASGKADVKFTLAPEHFAPLFTGKLRPTTALMTKKLQISGDMPGAMKL 406

  Fly   527 MDLQRS-AQGRI 537
            ..|.|. .:|::
 Worm   407 ESLLRKFTEGKL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScpXNP_524715.2 PRK08256 5..396 CDD:181327 35/192 (18%)
SCP-x_thiolase 9..395 CDD:238425 35/191 (18%)
SCP2 429..529 CDD:280250 26/100 (26%)
dhs-6NP_001021972.1 PRK08278 9..275 CDD:181349 20/119 (17%)
SCP2 319..411 CDD:376720 28/120 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4170
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.