DRSC/TRiP Functional Genomics Resources

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Protein Alignment hoip and RpL7A

DIOPT Version :9

Sequence 1:NP_001260293.1 Gene:hoip / 44173 FlyBaseID:FBgn0286786 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_001284944.1 Gene:RpL7A / 31588 FlyBaseID:FBgn0014026 Length:271 Species:Drosophila melanogaster


Alignment Length:138 Identity:39/138 - (28%)
Similarity:63/138 - (45%) Gaps:15/138 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTEEVNPKAFPLADAQLTAKIMNLLQQALNYNQLRK------GANEATKTLNRGLADIVVLAGDA 59
            :.|:..|:: |||......||.....:..:....:|      |.|..||.:.:..|.:||:|.|.
  Fly   103 LLEKYRPES-PLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDV 166

  Fly    60 EPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTT-------NEGSQLKSQITS 117
            :|:|::|.||.||....|||..|:.|..|||... .:.....::||       |.|..|::..|:
  Fly   167 DPLELVLFLPALCRKMGVPYCIVKGKARLGRLVR-RKTCTTLALTTVDNNDKANFGKVLEAVKTN 230

  Fly   118 IQQEIERL 125
            ..:..|.:
  Fly   231 FNERHEEI 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoipNP_001260293.1 SNU13 6..127 CDD:411046 38/133 (29%)
RpL7ANP_001284944.1 PTZ00365 18..271 CDD:240382 39/138 (28%)
Ribosomal_L7Ae 37..257 CDD:294400 39/138 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23105
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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