DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX1 and YPT10

DIOPT Version :9

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_009823.2 Gene:YPT10 / 852567 SGDID:S000000468 Length:199 Species:Saccharomyces cerevisiae


Alignment Length:166 Identity:58/166 - (34%)
Similarity:86/166 - (51%) Gaps:14/166 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIIL------DEVKIKLQIWDTAG 65
            ||::||...||||.:|.|........|.:  .||..:|.|..|.:      .|.:|.::||||||
Yeast     6 KVVLLGDSSVGKTSIVTRLKSGKFLAKHA--ATIGAAFITKTIEVPSNDSSTEKRIHMEIWDTAG 68

  Fly    66 QERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAV 130
            ||||:::.|||||:||.|::||:|....:....|:|.|:|....|...:: :||||.|:..:.  
Yeast    69 QERYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQDLQDRAQGTQVI-IVGNKYDLVCEE-- 130

  Fly   131 SREEAFVFATSIGATYFETSTETDQG---LEQVFIS 163
            ...|..:.|...|..|...|.:|...   |.::.||
Yeast   131 HSGEVTIPAELQGLPYVAVSAKTGYNFDTLNKIIIS 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Ras 7..166 CDD:278499 58/166 (35%)
Rab 7..166 CDD:206640 58/166 (35%)
YPT10NP_009823.2 Rab 5..158 CDD:206640 55/156 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0092
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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