DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RAB11c

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_172434.1 Gene:RAB11c / 837490 AraportID:AT1G09630 Length:217 Species:Arabidopsis thaliana


Alignment Length:208 Identity:74/208 - (35%)
Similarity:114/208 - (54%) Gaps:14/208 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKN--TLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERY 69
            ||:::|..||||:.|:.|:.:|  .|..|.    ||.|.|.|..:.::...:|.|||||||||||
plant    14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKS----TIGVEFATRTLQVEGRTVKAQIWDTAGQERY 74

  Fly    70 RAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
            ||:...|||.|..|:||:|:|:..||..:..|::||..:....:::.|:|||.|::..|||:.|:
plant    75 RAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATED 139

  Fly   135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSLRSFQSTDSLAYTNTNTAFS 199
            |..:|...|.::.|||......:|:.|.:....:.|:..:   .|:.|.|:|     .|.|....
plant   140 AQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISK---KSISSDQTT-----ANANIKEG 196

  Fly   200 HTVAALARSSGNA 212
            .|:...|.|..||
plant   197 QTIDVAATSESNA 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 62/160 (39%)
RAB11cNP_172434.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..216 CDD:476819 74/208 (36%)

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