DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RABA1f

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_200894.1 Gene:RABA1f / 836207 AraportID:AT5G60860 Length:217 Species:Arabidopsis thaliana


Alignment Length:180 Identity:69/180 - (38%)
Similarity:103/180 - (57%) Gaps:11/180 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKN--TLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERY 69
            ||:::|..||||:.|:.|:.:|  :|..|.    ||.|.|.|.:|.:|:..:|.|||||||||||
plant    15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKS----TIGVEFATRSIHVDDKIVKAQIWDTAGQERY 75

  Fly    70 RAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
            ||:...|||.|..|:||:|:|::.||..::.|::||..:....:::..||||.|::..||||.|:
plant    76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTED 140

  Fly   135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLA-----DEGKSPS 179
            |..||......:.|||......:|..|......:.|:.     |.|..|:
plant   141 AKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 65/160 (41%)
RABA1fNP_200894.1 Rab11_like 11..175 CDD:206660 65/163 (40%)

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