DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RABH1c

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_195699.1 Gene:RABH1c / 830148 AraportID:AT4G39890 Length:214 Species:Arabidopsis thaliana


Alignment Length:197 Identity:62/197 - (31%)
Similarity:108/197 - (54%) Gaps:21/197 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIK---NTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQER 68
            |::.||.:.||||.::.|::.   :|.::     |||.:.|.:..:.|::..::||:||||||||
plant    11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQ-----PTIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70

  Fly    69 YRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHR-NVQDPMILTLVGNKMDMQAQRAVSR 132
            :|::.|.|.|:::.||:|:|::..:||.....||:::|| ..|..:|:.|||||.|:..:|.||.
plant    71 FRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSI 135

  Fly   133 EEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSLRSFQ---STDSLAYTNT 194
            .|........|..:.|||.:.:..::.:|...|..|         |.:.|:.   .:|.:...|.
plant   136 SEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAAL---------PGVDSYSLATKSDDMVDVNL 191

  Fly   195 NT 196
            .|
plant   192 KT 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 55/162 (34%)
RABH1cNP_195699.1 Rab6 10..171 CDD:206654 56/164 (34%)

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