DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RABB1C

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_193450.1 Gene:RABB1C / 827428 AraportID:AT4G17170 Length:211 Species:Arabidopsis thaliana


Alignment Length:173 Identity:65/173 - (37%)
Similarity:99/173 - (57%) Gaps:10/173 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVP----TIAVSFFTCNIILDEVKIKLQIWDTAGQE 67
            |.:::|..||||:.|::::......      |    ||.|.|....|.:|...||||||||||||
plant     8 KYIIIGDTGVGKSCLLLQFTDKRFQ------PVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQE 66

  Fly    68 RYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSR 132
            .:|::...|||.|..|:||:|:|:.:||..:.||:::..::....|.:.|:|||.|:..:||||.
plant    67 SFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVST 131

  Fly   133 EEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEG 175
            ||...||...|..:.|.|.:|.|.:|:.||.||..:.:...:|
plant   132 EEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDG 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 63/162 (39%)
RABB1CNP_193450.1 PLN03108 1..210 CDD:178655 65/173 (38%)

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