DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RAB8

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_190929.1 Gene:RAB8 / 824529 AraportID:AT3G53610 Length:216 Species:Arabidopsis thaliana


Alignment Length:194 Identity:74/194 - (38%)
Similarity:112/194 - (57%) Gaps:6/194 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |:|::|..||||:.|::|:...:.  ..|.:.||.:.|....|.||..:|||||||||||||:|.
plant    17 KLLLIGDSGVGKSCLLLRFSDGSF--TTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRT 79

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDM-QAQRAVSREEA 135
            :...|||.|...:||:|:|...:|..|::||:.:.::..|.:...|||||.|| :::|||.:.:.
plant    80 ITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKG 144

  Fly   136 FVFATSIGATYFETSTETDQGLEQVFISTAQGL-VRLADEG--KSPSLRSFQSTDSLAYTNTNT 196
            ...|...|..:||||.:|:..:|:||.|.|:.: .||||..  ..|.......:|..|.|:..|
plant   145 QALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQAT 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 64/159 (40%)
RAB8NP_190929.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 65/164 (40%)

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