DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RABA1g

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_188124.1 Gene:RABA1g / 820735 AraportID:AT3G15060 Length:217 Species:Arabidopsis thaliana


Alignment Length:170 Identity:69/170 - (40%)
Similarity:103/170 - (60%) Gaps:6/170 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKN--TLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERY 69
            ||:::|..||||:.|:.|:.:|  :|..|.    ||.|.|.|.:|.:||..:|.|||||||||||
plant    15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKS----TIGVEFATRSIHVDEKIVKAQIWDTAGQERY 75

  Fly    70 RAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
            ||:...|||.|..|:||:|:|::.||..::.|::||..:.:..:::.|||||.|::..||||.|:
plant    76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTED 140

  Fly   135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADE 174
            |..||......:.|||......:|..|......:.|:|.:
plant   141 AKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 67/160 (42%)
RABA1gNP_188124.1 Rab11_like 11..175 CDD:206660 67/163 (41%)

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