DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RABH1d

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_179816.1 Gene:RABH1d / 816761 AraportID:AT2G22290 Length:207 Species:Arabidopsis thaliana


Alignment Length:192 Identity:57/192 - (29%)
Similarity:102/192 - (53%) Gaps:17/192 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIK---NTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQER 68
            |::.||.:.||||.::.|::.   :|.::     .||.:.|.:..:.|::..::||:||||||||
plant    11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQ-----ATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70

  Fly    69 YRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSRE 133
            :|::.|.|.|:::.|::|:|:....:|.....||:|:.......:|:.|||||.|:..:|.||.|
plant    71 FRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLVGNKTDLVEKRQVSIE 135

  Fly   134 EAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSLRSFQSTDSLAYTNTN 195
            |........|..:.|||.:....::.:|...|..|         |.:.|:.:|.:....:.|
plant   136 EGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAAL---------PGMESYSNTKNEDMVDVN 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 51/161 (32%)
RABH1dNP_179816.1 Rab6 10..170 CDD:206654 52/163 (32%)

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