DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and rab6a

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001315458.1 Gene:rab6a / 793785 ZFINID:ZDB-GENE-040426-2849 Length:208 Species:Danio rerio


Alignment Length:178 Identity:57/178 - (32%)
Similarity:98/178 - (55%) Gaps:11/178 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |::.||.:.||||.|:.|::.::.  ..:...||.:.|.:..:.|::..::||:||||||||:|:
Zfish    15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 77

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :.|.|.|::..|::|:|:|...:|.:...||.::.......:|:.|||||.|:..:|.||.||..
Zfish    78 LIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGE 142

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSLRSFQ 184
            ..|..:...:.|||.:....::|:|...|..|         |.:.|.|
Zfish   143 RKAKELNVMFIETSAKAGYNVKQLFRRVAAAL---------PGMESTQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 52/158 (33%)
rab6aNP_001315458.1 Rab6 14..174 CDD:206654 53/160 (33%)

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