DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and rab12

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:XP_002937521.2 Gene:rab12 / 779581 XenbaseID:XB-GENE-492791 Length:248 Species:Xenopus tropicalis


Alignment Length:184 Identity:63/184 - (34%)
Similarity:107/184 - (58%) Gaps:8/184 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            :|:::||||||||.|:.|:..:|.  .|:...|:.|.|....:.|...||:|||||||||||:.:
 Frog    48 QVIIIGSRGVGKTSLMERFTDDTF--CEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNS 110

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :...|||:|...|||:|:|:.:||.::..|::.:.:...:...|.|||||:|.:..|.::|::..
 Frog   111 ITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETDREITRQQGE 175

  Fly   137 VFATSI-GATYFETSTETDQGLEQVFISTAQGLVR-----LADEGKSPSLRSFQ 184
            .||..| |..:.|.|.:.:..::::|:.....:::     |.....|.|:.|.|
 Frog   176 KFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDLVRSELSNSILSLQ 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 58/159 (36%)
rab12XP_002937521.2 P-loop containing Nucleoside Triphosphate Hydrolases 47..248 CDD:476819 63/184 (34%)

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