DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and rab21

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001070133.1 Gene:rab21 / 767727 ZFINID:ZDB-GENE-060929-1062 Length:216 Species:Danio rerio


Alignment Length:166 Identity:67/166 - (40%)
Similarity:114/166 - (68%) Gaps:2/166 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            ||::||...||||.||:||.:|..:.|  .:.|:..||.|..:.:...::.|.|||||||||:.|
Zfish    12 KVVLLGEGCVGKTSLVLRYCENKFNDK--HITTLQASFLTKKLNITGKRVNLAIWDTAGQERFHA 74

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :.|:|||::|.||||:|:|...:|.::|:|::||.:.:.:.:.|.:||||:|::.:|.||.|||.
Zfish    75 LGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVEEAE 139

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLA 172
            .:|.|:||.::.||.:.::|:|::|:...:.::..|
Zfish   140 GYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETA 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 66/158 (42%)
rab21NP_001070133.1 Rab21 11..172 CDD:133323 66/161 (41%)

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