DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and rab21

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001016319.1 Gene:rab21 / 549073 XenbaseID:XB-GENE-486436 Length:221 Species:Xenopus tropicalis


Alignment Length:178 Identity:71/178 - (39%)
Similarity:119/178 - (66%) Gaps:7/178 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            ||::||...||||.||:||.:|..:.|  .:.|:..||.|..:.:...::.|.|||||||||:.|
 Frog    19 KVVLLGEGCVGKTSLVLRYCENKFNDK--HITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHA 81

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :.|:|||::|.||||:|:|...:|.::|:|::||.:.:.:.:.|.:||||:|::.:|.||.:||.
 Frog    82 LGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSVQEAE 146

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLA--DE---GKSPS 179
            .:|.|:||.::.||.:.::|:|::|:...:.::..|  ||   |..||
 Frog   147 TYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQTDERAKGNGPS 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 65/158 (41%)
rab21NP_001016319.1 Rab21 18..179 CDD:133323 65/161 (40%)

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