DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RAB4B

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_057238.3 Gene:RAB4B / 53916 HGNCID:9782 Length:213 Species:Homo sapiens


Alignment Length:170 Identity:61/170 - (35%)
Similarity:98/170 - (57%) Gaps:2/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |.||:||.|.||:.|:.::|:|..  |:....||.|.|.:..:.:....:||||||||||||:|:
Human    10 KFLVIGSAGTGKSCLLHQFIENKF--KQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRS 72

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            |...|||.|..|:||:|:|..:|:..:.:|:.:........:::.|.|||.|:..:|.|:..||.
Human    73 VTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEAS 137

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGK 176
            .||......:.|||..|.:.:|:.|:..|:.::...|.|:
Human   138 RFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGE 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 58/158 (37%)
RAB4BNP_057238.3 Rab4 9..169 CDD:206696 59/160 (37%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 39..44 2/4 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 65..74 6/8 (75%)

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