DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RAB8A

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_005361.2 Gene:RAB8A / 4218 HGNCID:7007 Length:207 Species:Homo sapiens


Alignment Length:175 Identity:63/175 - (36%)
Similarity:100/175 - (57%) Gaps:5/175 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |:|::|..|||||.::.|:.::..:  .:.:.||.:.|....|.||..:|||||||||||||:|.
Human    10 KLLLIGDSGVGKTCVLFRFSEDAFN--STFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRT 72

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :...|||.|...:||:|:|..|:|..|::||:.:..:....:...::|||.|:..:|.||:|...
Human    73 ITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGE 137

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLAD---EGKSP 178
            ..|...|..:.|||.:.:..:|..|.:.|:.:....|   ||.||
Human   138 KLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 57/158 (36%)
RAB8ANP_005361.2 Rab8_Rab10_Rab13_like 6..172 CDD:206659 58/163 (36%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 2/15 (13%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 10/16 (63%)

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