DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RAB44

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:XP_054211399.1 Gene:RAB44 / 401258 HGNCID:21068 Length:1027 Species:Homo sapiens


Alignment Length:176 Identity:54/176 - (30%)
Similarity:90/176 - (51%) Gaps:9/176 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VLVLGSRGVGKTRLVIRYIKNTLHRKE---SEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERY 69
            |:.||...||||..:     :.||:..   ....|:.|.|....:::|.....||:|||||||||
Human   842 VIFLGDSNVGKTSFL-----HLLHQNSFATGLTATVGVDFRVKTLLVDNKCFVLQLWDTAGQERY 901

  Fly    70 RAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
            .::.....|.|:..:|::|:|..::|..::.|:..|.....|.:::.|:|||||.:.:|.||.|.
Human   902 HSMTRQLLRKADGVVLMYDITSQESFAHVRYWLDCLQDAGSDGVVILLLGNKMDCEEERQVSVEA 966

  Fly   135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSL 180
            ....|..:|..:.|.|......:.:..::.|:.| |:.:||...||
Human   967 GQQLAQELGVYFGECSAALGHNILEPVVNLARSL-RMQEEGLKDSL 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 47/160 (29%)
RAB44XP_054211399.1 FRQ1 <44..110 CDD:444056
COG4372 191..>339 CDD:443500
PHA03247 <326..653 CDD:223021
PRK07764 <529..837 CDD:236090
Rab 840..998 CDD:206640 47/160 (29%)
Blue background indicates that the domain is not in the aligned region.

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