DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and rab35l

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_989002.1 Gene:rab35l / 394598 XenbaseID:XB-GENE-5809894 Length:201 Species:Xenopus tropicalis


Alignment Length:171 Identity:63/171 - (36%)
Similarity:108/171 - (63%) Gaps:3/171 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |:|::|..||||:.|::|:..|:.  ..|.:.||.|.|....::||..::||||||||||||:|.
 Frog    11 KLLLIGDSGVGKSSLLLRFSDNSF--SGSYITTIGVDFKIRTLVLDGERVKLQIWDTAGQERFRT 73

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :...||||.:..|:|:|:|..::|..:|.|:.|:.:|. |.:...|||||.|..:::.|...:|.
 Frog    74 ITSTYYRNTHGVIVVYDVTSPESFVNVKRWLHEITQNC-DSVCTVLVGNKDDDPSRKRVEAADAK 137

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKS 177
            .||..:|...||||.:.::.:|::|:|..:.::|:..:.::
 Frog   138 RFADQMGVRMFETSAKENRNVEEMFLSVTRMVLRMKKDNQA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 62/158 (39%)
rab35lNP_989002.1 P-loop containing Nucleoside Triphosphate Hydrolases 4..201 CDD:476819 63/171 (37%)

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