DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab2

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:173 Identity:63/173 - (36%)
Similarity:101/173 - (58%) Gaps:10/173 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVP----TIAVSFFTCNIILDEVKIKLQIWDTAGQE 67
            |.:::|..||||:.|::::......      |    ||.|.|....|.:|..:||||||||||||
  Fly     8 KYIIIGDTGVGKSCLLLQFTDKRFQ------PVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66

  Fly    68 RYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSR 132
            .:|::...|||.|..|:||:|:|:.:||..:.:|:::..::....|::.|:|||.|:.::|.|.:
  Fly    67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKK 131

  Fly   133 EEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEG 175
            ||...||...|..:.|||..|...:|:.||:||:.:.....||
  Fly   132 EEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEG 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 60/162 (37%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 63/173 (36%)

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