DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab30

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster


Alignment Length:224 Identity:70/224 - (31%)
Similarity:109/224 - (48%) Gaps:29/224 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |::::|:.|||||.||.|:.:...  ...:..||.|.|....:.::..||||||||||||||:|:
  Fly     9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRS 71

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :...|||:|:|.|||:|::...||..:..|::|:.......::..|||||.| :..|.:..:...
  Fly    72 ITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIPTQIGE 135

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLA-----------------DEGKSPSLRSFQ 184
            .||......:.|||.:..:.:|::|...|..|:..|                 .||.|..|.|| 
  Fly   136 EFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGLGSF- 199

  Fly   185 STDSLAYTNTNTAFSHTVAALARSSGNAA 213
                    :...|.|:....||....|::
  Fly   200 --------SAKAAQSNCCGGLASGGSNSS 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 56/158 (35%)
Rab30NP_609094.1 Rab30 1..168 CDD:133314 57/161 (35%)

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