DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab21

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster


Alignment Length:191 Identity:70/191 - (36%)
Similarity:120/191 - (62%) Gaps:4/191 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIIL-DEVKIKLQIWDTAGQERYR 70
            |.::||...||||.||:||:::..:.:  .:.|:..||.:..:.| |..:.:|.|||||||||:.
  Fly    15 KAVLLGEGCVGKTSLVLRYMEDRFNAQ--HLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFH 77

  Fly    71 AVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEA 135
            |:.|:|||.::.|:||:|:|...:|.::|||::||.:.....:.|.:||||.|::.||||:.:||
  Fly    78 ALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEA 142

  Fly   136 FVFATSIGATYFETSTETDQGLEQVF-ISTAQGLVRLADEGKSPSLRSFQSTDSLAYTNTN 195
            ..:|.::||.|.|||.:.::|:.::| :.|...|.:|:......|....|:.|:....|::
  Fly   143 LQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSD 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 64/160 (40%)
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 64/162 (40%)

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