DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab10

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:163 Identity:55/163 - (33%)
Similarity:92/163 - (56%) Gaps:2/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |:|::|..|||||.::.|:..:..  ..:.:.||.:.|....:.|...||||||||||||||:..
  Fly    11 KLLLIGDSGVGKTCILFRFSDDAF--TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHT 73

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :...|||.|...:||:|:|..|:|..|..|::.:..:..:.:...::|||.||..:|.|::|...
  Fly    74 ITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKERGE 138

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLV 169
            ..|...|..:.|||.:::..:|:.|...|:.::
  Fly   139 AIAREHGIRFMETSAKSNINIERAFCELAEAIL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 54/158 (34%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 55/163 (34%)

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