DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX1 and CG4789

DIOPT Version :9

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_573166.1 Gene:CG4789 / 32668 FlyBaseID:FBgn0030792 Length:274 Species:Drosophila melanogaster


Alignment Length:113 Identity:28/113 - (24%)
Similarity:52/113 - (46%) Gaps:25/113 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEV-PTIAVSFFTCNIILDEVKIK------------- 57
            :::|:|..|||||.|.     :.:...|:.: |...|.   |||   :||:.             
  Fly     8 RIVVVGDSGVGKTSLT-----HLITHNEALIRPGWTVG---CNI---QVKMHPFREGTARECPYF 61

  Fly    58 LQIWDTAGQERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQEL 105
            ::::|..|...::....::|...:..|||.|||..|:..::..|:.|:
  Fly    62 VELFDVGGSLNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEI 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Ras 7..166 CDD:278499 28/113 (25%)
Rab 7..166 CDD:206640 28/113 (25%)
CG4789NP_573166.1 P-loop_NTPase 7..228 CDD:304359 28/113 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454452
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24073
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.