DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab9Fb

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:162 Identity:59/162 - (36%)
Similarity:92/162 - (56%) Gaps:2/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |:||||..||||:.|::|:..|..  .|..|.|:.:.|...|:.|....:.||||||||.||:::
  Fly     9 KILVLGDIGVGKSCLLMRFSDNRF--TEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :.|.|||.|:..:||:|:|..|:|..|..|::|:.|...:.:.:.|||||.|....|.|..|:.|
  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGF 136

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGL 168
            .:|......::|.|.::...:..||...:.|:
  Fly   137 NYANHRALGFYEVSAKSGANVNDVFNMLSVGI 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 58/158 (37%)
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 58/157 (37%)

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