DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab27

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster


Alignment Length:221 Identity:65/221 - (29%)
Similarity:100/221 - (45%) Gaps:43/221 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRGIEGKVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILD----EVKIKLQIW 61
            :.|...:.||||..|||||.|:.:|.....|.:  .:.|:.:.|....::.:    ..:|.||||
  Fly    13 LAGSGEQFLVLGDSGVGKTCLLYQYTDGRFHTQ--FISTVGIDFREKRLLYNSRGRRHRIHLQIW 75

  Fly    62 DTAGQERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQEL--HRNVQDPMILTLVGNKMDM 124
            |||||||:|::...:||:|...:|:||||..|:|.|..:|:.:|  |...:||.:: |.|||.|:
  Fly    76 DTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVV-LCGNKCDL 139

  Fly   125 QAQRAVSREEAFVFATSIGATYFETSTETDQGLEQ------------------------------ 159
            ...|.|||::...........|.|||..|...:::                              
  Fly   140 LQLRVVSRDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREFSLLLTQSR 204

  Fly   160 ----VFISTAQGLVRLADEGKSPSLR 181
                :.....:.||||.|..:.|..|
  Fly   205 CLPNIAYGQPEDLVRLHDRREEPCSR 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 57/198 (29%)
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 57/170 (34%)

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