DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab21

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001004238.1 Gene:Rab21 / 299799 RGDID:1303150 Length:223 Species:Rattus norvegicus


Alignment Length:175 Identity:69/175 - (39%)
Similarity:117/175 - (66%) Gaps:4/175 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RGIEGKVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQ 66
            |....||::||...||||.||:||.:|..:.|  .:.|:..||.|..:.:...::.|.|||||||
  Rat    14 RAYSFKVVLLGEGCVGKTSLVLRYCENKFNDK--HITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76

  Fly    67 ERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVS 131
            ||:.|:.|:|||::|.||||:|:|...:|.::|:|::||.:.:.:.:.|.:||||:|::.:|.||
  Rat    77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVS 141

  Fly   132 REEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLA--DE 174
            .:||..:|.|:||.::.||.:.::|:|::|:...:.::..|  ||
  Rat   142 IQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 65/158 (41%)
Rab21NP_001004238.1 Rab21 18..179 CDD:133323 65/162 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9UL25 41..54 2/14 (14%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9UL25 74..92 10/17 (59%)

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