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Protein Alignment RabX1 and Rab5b
DIOPT Version :9
Sequence 1: | NP_524713.1 |
Gene: | RabX1 / 44172 |
FlyBaseID: | FBgn0015372 |
Length: | 261 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001073405.1 |
Gene: | Rab5b / 288779 |
RGDID: | 1306489 |
Length: | 215 |
Species: | Rattus norvegicus |
Alignment Length: | 172 |
Identity: | 69/172 - (40%) |
Similarity: | 108/172 - (62%) |
Gaps: | 4/172 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
|:::||...|||:.||:|::|...| |.:..||..:|.|.::.||:..:|.:||||||||||.:
Rat 22 KLVLLGESAVGKSSLVLRFVKGQFH--EYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHS 84
Fly 72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
:||||||.|.|||:|:|:|..:||...|:|::||.|.....:::.|.|||.|:..:|.|..|||.
Rat 85 LAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Fly 137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSP 178
.:|......:.|||.:|...:..:|::.|:.|.: .|.::|
Rat 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK--SEPQNP 189
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0092 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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