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Protein Alignment RabX1 and Rab5c
DIOPT Version :9
Sequence 1: | NP_524713.1 |
Gene: | RabX1 / 44172 |
FlyBaseID: | FBgn0015372 |
Length: | 261 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099310.2 |
Gene: | Rab5c / 287709 |
RGDID: | 1307095 |
Length: | 216 |
Species: | Rattus norvegicus |
Alignment Length: | 162 |
Identity: | 67/162 - (41%) |
Similarity: | 104/162 - (64%) |
Gaps: | 2/162 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
|:::||...|||:.||:|::|...| |.:..||..:|.|..:.||:..:|.:||||||||||.:
Rat 23 KLVLLGESAVGKSSLVLRFVKGQFH--EYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHS 85
Fly 72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
:||||||.|.|||:|:|:|...||...|:|::||.|.....:::.|.|||.|:.::|||..:||.
Rat 86 LAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Fly 137 VFATSIGATYFETSTETDQGLEQVFISTAQGL 168
.:|......:.|||.:|...:.::|::.|:.|
Rat 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0092 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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