DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RAB30

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens


Alignment Length:187 Identity:67/187 - (35%)
Similarity:107/187 - (57%) Gaps:16/187 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |::::|:.|||||.||.|:.:...  ...:..||.|.|....:.::..|:||||||||||||:|:
Human    11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRS 73

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :...|||:|||.||.:|:|..::|..:..|::|:.:...:.:|..|||||:|:..:|.||::.|.
Human    74 ITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVR--------------LADEGKSPS 179
            .|:.:....|.|||.:....:|::|:..|..|:.              |..||||.|
Human   139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSIS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 59/158 (37%)
RAB30NP_055303.2 Rab30 3..171 CDD:133314 60/161 (37%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 2/7 (29%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 8/15 (53%)

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