DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab5a

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_080163.1 Gene:Rab5a / 271457 MGIID:105926 Length:215 Species:Mus musculus


Alignment Length:176 Identity:69/176 - (39%)
Similarity:111/176 - (63%) Gaps:4/176 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |:::||...|||:.||:|::|...|  |.:..||..:|.|..:.||:..:|.:||||||||||.:
Mouse    22 KLVLLGESAVGKSSLVLRFVKGQFH--EFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHS 84

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :||||||.|.|||:|:|:|..::|...|:|::||.|.....:::.|.|||.|:..:|||..:||.
Mouse    85 LAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSLRS 182
            .:|......:.|||.:|...:.::|::.|:.|.:  :|.::|...|
Mouse   150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK--NEPQNPGANS 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 64/158 (41%)
Rab5aNP_080163.1 Rab5_related 20..182 CDD:206653 65/161 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 44..56 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 77..93 12/15 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..215 4/15 (27%)

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