DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab6b

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:XP_006511799.1 Gene:Rab6b / 270192 MGIID:107283 Length:234 Species:Mus musculus


Alignment Length:153 Identity:50/153 - (32%)
Similarity:89/153 - (58%) Gaps:2/153 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRAVAPMYYRNA 80
            ||||.|:.|::.::.  ..:...||.:.|.:..:.|::..::||:||||||||:|::.|.|.|::
Mouse    50 VGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS 112

  Fly    81 NAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAFVFATSIGAT 145
            ..|::|:|:|...:|.:...||.::.......:|:.|||||.|:..:|.::.||....|..:...
Mouse   113 TVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVM 177

  Fly   146 YFETSTETDQGLEQVFISTAQGL 168
            :.|||.:|...::|:|...|..|
Mouse   178 FIETSAKTGYNVKQLFRRVASAL 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 48/149 (32%)
Rab6bXP_006511799.1 Rab6 50..200 CDD:206654 49/151 (32%)

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