DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab20

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_035357.1 Gene:Rab20 / 19332 MGIID:102789 Length:233 Species:Mus musculus


Alignment Length:128 Identity:39/128 - (30%)
Similarity:69/128 - (53%) Gaps:7/128 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRGIEGKVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAG 65
            ||..:||:::||...||||.|:.||::   .|....|.|:..:|:    :.......:.||||||
Mouse     1 MRKPDGKIVLLGDMNVGKTSLLQRYME---RRFPDTVSTVGGAFY----LKQWRSFNISIWDTAG 58

  Fly    66 QERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQR 128
            :|::..:..:|.|.|.|.||.:|:...::..|::.....|.....:..:..:||||:|:.::|
Mouse    59 REQFHGLGSLYCRGAAAIILTYDVNHPQSLFELEDRFLGLTETANNDCLFAIVGNKVDLTSER 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 36/122 (30%)
Rab20NP_035357.1 Rab20 7..232 CDD:133326 36/122 (30%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 28..41 3/12 (25%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 55..72 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..138 1/3 (33%)

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