DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab17

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_033024.1 Gene:Rab17 / 19329 MGIID:104640 Length:214 Species:Mus musculus


Alignment Length:173 Identity:67/173 - (38%)
Similarity:110/173 - (63%) Gaps:5/173 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |:::|||..||||.|.:||:|...   .:.:||:..:|||..:.|....:||:||||||||:|::
Mouse    21 KLVLLGSSSVGKTSLALRYMKQDF---SNVLPTVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQS 82

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQ-DPMILTLVGNKMDMQAQRAVSREEA 135
            |..:|:|.||||:||:|:|:..:|.:.:.|:::|.:..| ..:::.|||||.|:..:|.|:.:|.
Mouse    83 VCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQEG 147

  Fly   136 FVFATSIGATYFETSTETDQGLEQVFISTAQGLV-RLADEGKS 177
            ..||.|....:.|||.:.:..:.::|.:.||.|: |..|.|.|
Mouse   148 KEFAESKSLLFMETSAKLNYQVSEIFNTVAQELLQRAGDTGSS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 60/159 (38%)
Rab17NP_033024.1 Rab5_related 21..181 CDD:206653 62/162 (38%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 43..54 2/13 (15%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 75..91 8/15 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..204 4/8 (50%)

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