DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and C52B11.5

DIOPT Version :9

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_508236.1 Gene:C52B11.5 / 183717 WormBaseID:WBGene00016874 Length:238 Species:Caenorhabditis elegans


Alignment Length:199 Identity:43/199 - (21%)
Similarity:87/199 - (43%) Gaps:19/199 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLH-RKESE--VPTIAVSFFTCNIILDEVKIKLQIWDTAGQER 68
            |::|:|::..||:..:.|......| .|::|  ...||...|...:.::  .|:..:.....::.
 Worm    26 KIIVVGAKNAGKSTFIERVEFGKFHEEKQTEKLYRVIAKKVFEQTLTVE--LIEKDLGGLTNEDN 88

  Fly    69 YRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSRE 133
            ......|  |:.:|.:|.:.....::|.::|..:..:.|.:.....:|:||.|.|:: :..|..:
 Worm    89 GFKKTEM--RDVDAVLLFYAADDLESFKQLKENLVHVQRKIPPNANITVVGTKADVK-EMQVQWQ 150

  Fly   134 EAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSLRSFQSTDSLAYTNTNTAF 198
            |...||.:.|.:.||||::|...:|.:.....:.:..          |.|.|.|....:| ...:
 Worm   151 EVDSFAENQGFSCFETSSKTGVNVEIILHDILETIFE----------RRFASDDDEVLSN-QPVY 204

  Fly   199 SHTV 202
            :.||
 Worm   205 ASTV 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Ras 7..166 CDD:278499 36/161 (22%)
Rab 7..166 CDD:206640 36/161 (22%)
C52B11.5NP_508236.1 P-loop_NTPase 25..183 CDD:304359 36/161 (22%)
Ras 26..187 CDD:278499 36/165 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0092
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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