Protein Alignment RabX1 and rab-5

DIOPT Version :9

• Sequence 1: NP_524713.1
• Gene: RabX1 / 44172
• FlyBaseID: FBgn0015372
• Length: 261
• Species: Drosophila melanogaster
• Sequence 2: NP_492481.1
• Gene: rab-5 / 172755
• WormBaseID: WBGene00004268
• Length: 208
• Species: Caenorhabditis elegans
• Alignment Length: 167
• Identity: 68/167 - (40%)
• Similarity: 105/167 - (62%)
• Gaps: 2/167 - (1%)

  Fly     2 RGIEGKVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQ 66
            |..:.|:::||...|||:.||:|::|...|  |.:..||..:|.|..:.||:..||.:|||||||
 Worm    16 RTCQFKLVLLGESAVGKSSLVLRFVKGQFH--EYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 78

  Fly    67 ERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVS 131
            |||.::||||||.|.|||:|:|:|..::|.:.|:|::||.|.....:::.|.|||.|:..:|.|.
 Worm    79 ERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVE 143

  Fly   132 REEAFVFATSIGATYFETSTETDQGLEQVFISTAQGL 168
            .|||..:|......:.|||.:|...:..:|::.|:.|
 Worm   144 YEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RabX1	NP_524713.1	Ras	7..166	CDD:278499	65/158 (41%)
		Rab	7..166	CDD:206640	65/158 (41%)
rab-5	NP_492481.1	Rab5_related	19..181	CDD:206653	67/164 (41%)
		Ras	21..181	CDD:278499	67/162 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0092
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810