DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab4

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:XP_313105.2 Gene:Rab4 / 1274041 VectorBaseID:AGAMI1_000885 Length:224 Species:Anopheles gambiae


Alignment Length:170 Identity:60/170 - (35%)
Similarity:95/170 - (55%) Gaps:2/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |.|::|..|.||:.|:..:|:|..  ||....||.|.|.:..:.:....|||||||||||||:|:
Mosquito    10 KFLIIGRAGSGKSCLLHHFIENKF--KEDSSHTIGVEFGSRIVNVGGKSIKLQIWDTAGQERFRS 72

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            |...|||.|..|:||:|.|...:|..:.:|:.:........:.:.|||||.|::..|.|:..||.
Mosquito    73 VTRSYYRGAAGALLVYDTTSRDSFNVLWNWLNDARTLASQNICILLVGNKKDLEEDREVTFLEAS 137

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGK 176
            .||......:.|||.:|.:.:|:.|:..::.::...:.|:
Mosquito   138 NFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGE 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 59/158 (37%)
Rab4XP_313105.2 Rab4 9..169 CDD:206696 59/160 (37%)

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