DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and Rab31

DIOPT Version :9

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_598446.2 Gene:Rab31 / 106572 MGIID:1914603 Length:195 Species:Mus musculus


Alignment Length:166 Identity:64/166 - (38%)
Similarity:101/166 - (60%) Gaps:6/166 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EGKVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERY 69
            |.||.:||..||||:.:|.|::::  |...:..|||..||.|..:.......|..|||||||||:
Mouse     6 ELKVCLLGDTGVGKSSIVCRFVQD--HFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 68

  Fly    70 RAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
            .::||||||.:.||::|:|:|:..:|..:|.|::||..:..:.:::.:.|||.|:...|.|..::
Mouse    69 HSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKD 133

  Fly   135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVR 170
            |..:|.||||...|||.:....:|::|    ||:.|
Mouse   134 AKEYAESIGAIVVETSAKNAINIEELF----QGISR 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Ras 7..166 CDD:278499 60/158 (38%)
Rab 7..166 CDD:206640 60/158 (38%)
Rab31NP_598446.2 Rab5_related 6..168 CDD:206653 64/166 (39%)
Ras 8..168 CDD:278499 63/164 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0092
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D579042at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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