DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and rab6b

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001090835.1 Gene:rab6b / 100038231 XenbaseID:XB-GENE-493829 Length:208 Species:Xenopus tropicalis


Alignment Length:162 Identity:52/162 - (32%)
Similarity:94/162 - (58%) Gaps:2/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |::.||.:.||||.|:.|::.::.  ..:...||.:.|.:..:.|::..::||:||||||||:|:
 Frog    15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 77

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :.|.|.|::..|::|:|:|...:|.:...||.::.......:|:.|||||.|:..:|.::.|...
 Frog    78 LIPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEAGE 142

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGL 168
            ..|..:...:.|||.:|...::|:|...|..|
 Frog   143 QKAKELNVMFIETSAKTGYNVKQLFRRVASAL 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 50/158 (32%)
rab6bNP_001090835.1 Rab6 14..174 CDD:206654 51/160 (32%)

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