DRSC/TRiP Functional Genomics Resources

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Protein Alignment sw and DNAI2

DIOPT Version :10

Sequence 1:NP_477075.2 Gene:sw / 44160 FlyBaseID:FBgn0003654 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001340096.1 Gene:DNAI2 / 64446 HGNCID:18744 Length:649 Species:Homo sapiens


Alignment Length:526 Identity:127/526 - (24%)
Similarity:222/526 - (42%) Gaps:109/526 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 PRKAHATDYYDEYNLNPGLEWEDEFTDDEESS----LQNLGNGFTSKLPPGYLTHGLPTVKDVAP 222
            |....|..:.:...::.|::.....::.|.:|    ::..|        ..::..|.|  |||  
Human    33 PNPELAEQFVERNPVDTGIQCSISMSEHEANSERFEMETRG--------VNHVEGGWP--KDV-- 85

  Fly   223 AITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSEN--VDIYTDYIGGG 285
              .|||:::....:|:|.:           .||:...:::.|.::|..:.:|  :|||.:|....
Human    86 --NPLELEQTIRFRKKVEK-----------DENYVNAIMQLGSIMEHCIKQNNAIDIYEEYFNDE 137

  Fly   286 DSEEANDERSHARLSLNRVFYDERWSKNRCITSMDW-------------STHFPELVVG----SY 333
            ::.|..:|...|: ::| ||.|.:..| |..|.:.|             ...|....||    ||
Human   138 EAMEVMEEDPSAK-TIN-VFRDPQEIK-RAATHLSWHPDGNRKLAVAYSCLDFQRAPVGMSSDSY 199

  Fly   334 HNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNP---NLILGGTYSGQIVLWD 395
            ..:.|:||:|:       ...|.|:|            ....:|||   :::|||.|:|||..||
Human   200 IWDLENPNKPE-------LALKPSSP------------LVTLEFNPKDSHVLLGGCYNGQIACWD 245

  Fly   396 NRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLEL-- 458
            .|  |.:.:.......::|..|||....:.::......|.|:||::..|.:..:|:|.:.:.|  
Human   246 TR--KGSLVAELSTIESSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKMSEPTEVVILDI 308

  Fly   459 --QQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEV--YERHLGPITGISTH 519
              :::...|:...|:.|.:......::|:|.|.|.|.:|....|....|  :..|.|||..:   
Human   309 TKKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTSAEKIVCTFPGHHGPIYAL--- 370

  Fly   520 YNQLSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSD-----------YVMDVAWSPVHPAL 573
              |.:|.:...|||.. |||.::||          ||:.:           |:.|.|||||.|.:
Human   371 --QRNPFYPKNFLTVG-DWTARIWS----------EDSRESSIMWTKYHMAYLTDAAWSPVRPTV 422

  Fly   574 FAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLA 638
            |......|.||:|:...:...||.|:.|.. .||..:....:|..:..|.:.|...:.:|:..|:
Human   423 FFTTRMDGTLDIWDFMFEQCDPTLSLKVCD-EALFCLRVQDNGCLIACGSQLGTTTLLEVSPGLS 486

  Fly   639 QPSRDE 644
            ...|:|
Human   487 TLQRNE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swNP_477075.2 Dynein_IC2 105..135 CDD:463291
WD40 316..632 CDD:475233 89/352 (25%)
WD40 repeat 316..365 CDD:293791 14/65 (22%)
WD40 repeat 371..409 CDD:293791 14/40 (35%)
WD40 repeat 418..457 CDD:293791 9/38 (24%)
WD40 repeat 469..555 CDD:293791 24/87 (28%)
WD40 repeat 561..599 CDD:293791 14/37 (38%)
WD40 repeat 607..633 CDD:293791 4/25 (16%)
DNAI2NP_001340096.1 WD40 166..472 CDD:475233 88/343 (26%)
WD40 repeat 166..215 CDD:293791 11/55 (20%)
WD40 repeat 220..259 CDD:293791 14/40 (35%)
WD40 repeat 267..307 CDD:293791 8/39 (21%)
WD40 repeat 314..361 CDD:293791 11/46 (24%)
WD40 repeat 367..403 CDD:293791 13/51 (25%)
WD40 repeat 410..435 CDD:293791 11/24 (46%)
WD40 repeat 455..489 CDD:293791 6/33 (18%)
DUF4795 493..>562 CDD:464990 127/526 (24%)
Blue background indicates that the domain is not in the aligned region.

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