DRSC/TRiP Functional Genomics Resources

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Protein Alignment sw and dnai1.1

DIOPT Version :9

Sequence 1:NP_477075.2 Gene:sw / 44160 FlyBaseID:FBgn0003654 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_021324725.1 Gene:dnai1.1 / 570363 ZFINID:ZDB-GENE-040910-7 Length:105 Species:Danio rerio


Alignment Length:74 Identity:18/74 - (24%)
Similarity:28/74 - (37%) Gaps:26/74 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 PELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMS-----TCFAKFNP--NLIL 383
            |.|.|...|..:.|.|..:.:                  ||..|:|     ||. :|||  .:|:
Zfish    12 PSLFVSQVHVFDLSINRFEAL------------------CQQRVVSTKRHLTCI-EFNPVHPIII 57

  Fly   384 GGTYSGQIV 392
            .|...|:::
Zfish    58 VGNDRGRVI 66

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swNP_477075.2 Dynein_IC2 107..135 CDD:402922
WD40 316..632 CDD:421866 18/74 (24%)
WD40 repeat 316..365 CDD:293791 6/38 (16%)
WD40 repeat 371..409 CDD:293791 9/29 (31%)
WD40 repeat 418..457 CDD:293791
WD40 repeat 469..555 CDD:293791
WD40 repeat 561..599 CDD:293791
WD40 repeat 607..633 CDD:293791
dnai1.1XP_021324725.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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