Protein Alignment sw and Sdic1

DIOPT Version :9

• Sequence 1: NP_477075.2
• Gene: sw / 44160
• FlyBaseID: FBgn0003654
• Length: 663
• Species: Drosophila melanogaster
• Sequence 2: NP_524670.2
• Gene: Sdic1 / 43984
• FlyBaseID: FBgn0067861
• Length: 517
• Species: Drosophila melanogaster
• Alignment Length: 571
• Identity: 478/571 - (83%)
• Similarity: 485/571 - (84%)
• Gaps: 62/571 - (10%)

  Fly    93 LQATVNGQSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLSCHSSPLSGYME 157
            |::|.:..|||||||||||||||||||||||||||||||||||||||||||||:.
  Fly     9 LRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAF---------- 63

  Fly   158 DWWRPRKAHATDYYDEYNLNPGLEWEDEFTDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAP 222
                                      |...|||||||||||||||||||||||||||||||||||
  Fly    64 --------------------------DAQGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAP 102

  Fly   223 AITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDS 287
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   103 AITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDS 167

  Fly   288 EEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNT 352
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   168 EEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNT 232

  Fly   353 KFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHP 417
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   233 KFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHP 297

  Fly   418 VYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLV 482
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   298 VYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLV 362

  Fly   483 MGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKD 547
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   363 MGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKD 427

  Fly   548 TKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSW 612
            ||||||||..      :|||||.                  .|....|..:....|||||.|.||
  Fly   428 TKPLYSFEQY------IAWSPVR------------------RQRPPGPDKTQPRHGAPALRRDSW 468

  Fly   613 TPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQSDEV 663
            |||||  ||||||||||||||||||||||||||||||||||||||||.||:
  Fly   469 TPSGL--CIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQGDEI 517

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sw	NP_477075.2	Dynein_IC2	107..135	CDD:402922	27/27 (100%)
		WD40	316..632	CDD:421866	271/315 (86%)
		WD40 repeat	316..365	CDD:293791	48/48 (100%)
		WD40 repeat	371..409	CDD:293791	37/37 (100%)
		WD40 repeat	418..457	CDD:293791	38/38 (100%)
		WD40 repeat	469..555	CDD:293791	85/85 (100%)
		WD40 repeat	561..599	CDD:293791	7/37 (19%)
		WD40 repeat	607..633	CDD:293791	21/25 (84%)
Sdic1	NP_524670.2	Dynein_IC2	23..51	CDD:288403	27/27 (100%)
		NtpH	108..>178	CDD:225368	69/69 (100%)
		WD40	196..>445	CDD:295369	245/272 (90%)
		WD40	<196..442	CDD:225201	242/251 (96%)
		WD40 repeat	196..245	CDD:293791	48/48 (100%)
		WD40 repeat	251..289	CDD:293791	37/37 (100%)
		WD40 repeat	298..337	CDD:293791	38/38 (100%)
		WD40 repeat	349..386	CDD:293791	36/36 (100%)
		WD40 repeat	393..435	CDD:293791	41/41 (100%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439699
Domainoid	1	1.000	50	1.000	Domainoid score	I18819
eggNOG	1	0.900	-	-		E1_KOG1587
Homologene	1	1.000	-	-		H37921
Inparanoid	1	1.050	624	1.000	Inparanoid score	I842
Isobase	1	0.950	-	0	Normalized mean entropy	S2725
OMA	1	1.010	-	-		QHG54336
OrthoDB	1	1.010	-	-		D1453532at2759
OrthoFinder	1	1.000	-	-		FOG0001314
OrthoInspector	1	1.000	-	-		mtm6471
orthoMCL	1	0.900	-	-		OOG6_101571
Panther	1	1.100	-	-	P	PTHR12442
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X812
	14	13.760