Protein Alignment sw and CG1571

DIOPT Version :10

• Sequence 1: NP_477075.2
• Gene: sw / 44160
• FlyBaseID: FBgn0003654
• Length: 663
• Species: Drosophila melanogaster
• Sequence 2: NP_572435.1
• Gene: CG1571 / 31725
• FlyBaseID: FBgn0029993
• Length: 651
• Species: Drosophila melanogaster
• Alignment Length: 474
• Identity: 114/474 - (24%)
• Similarity: 193/474 - (40%)
• Gaps: 75/474 - (15%)

  Fly   237 KEVNELSEEQKQMIILSENFQRFVVRAGRVIERALS------------ENVDIYTDYIGGGDSEE 289
            ||||...|||.|      ..::.|.|.....|:.||            ..::||.::......|.
  Fly    83 KEVNFNDEEQTQ------RHRKKVEREDSWGEQVLSMIRTTMSVAEQNNTLNIYQNFFADLPPEL 141

  Fly   290 ANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNN-------EESPNEPDGVV 347
            .:|.:...|..:..||:| .|...|.:.|::|..:.....:..|.|:       ....:||.|..
  Fly   142 GHDIKMRFRARVANVFHD-LWLPARQLRSIEWMPNNSRQFMTQYTNHFAKGERLRPVTDEPFGGT 205

  Fly   348 ---MVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPL 409
               .||:.| ....|...:..:..|........:.|.::|||..||:.|| ...:...||:..||
  Fly   206 NGFYVWDVK-NPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLW-GTFKGGLPIRNCPL 268

  Fly   410 SAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTL----ELQQRQSK--AIAI 468
            . .:|......|..|.:::.....|.|.||.:..|....|..|...|    |.|:|||:  :..:
  Fly   269 E-VSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQSRMDSHGV 332

  Fly   469 TSMAFPANEINSLVMGSEDGYVYSASRHGL--RSGVNEVYERHLGPITGISTHYNQLSPDFGHLF 531
            |.:.|........::||:.|:|:..:|.|:  ...:...|:..:||:..|:.     :|.|...|
  Fly   333 TVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINR-----NPFFVKNF 392

  Fly   532 LTSSIDWTIKLWS--LKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNL------ 588
            |.:. ||..::||  :||:.....|..|:. ::..|||....:||...|.:|.:|.|:|
  Fly   393 LVTG-DWRARIWSEEVKDSPSTMYFRKNAQ-ILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRK 455

  Fly   589 ---NQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDE----WS 646
               :.|.:|..|.:|           :.|.|..:.||.:.|..::..:.|::.|.:..|    .:
  Fly   456 PIRSVDFKVAIADLV-----------FRPEGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAA 509

  Fly   647 RFNTHLSEIKMNQS--DEV 663
            .|...:...|:.::  |||
  Fly   510 MFEREIVRCKLLEARYDEV 528

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sw	NP_477075.2	Dynein_IC2	105..135	CDD:463291
		WD40	316..632	CDD:475233	83/344 (24%)
		WD40 repeat	316..365	CDD:293791	11/58 (19%)
		WD40 repeat	371..409	CDD:293791	10/37 (27%)
		WD40 repeat	418..457	CDD:293791	10/42 (24%)
		WD40 repeat	469..555	CDD:293791	22/89 (25%)
		WD40 repeat	561..599	CDD:293791	13/46 (28%)
		WD40 repeat	607..633	CDD:293791	5/25 (20%)
CG1571	NP_572435.1	WD40	210..462	CDD:475233	67/261 (26%)
		WD40 repeat	229..269	CDD:293791	12/40 (30%)
		WD40 repeat	277..325	CDD:293791	13/47 (28%)
		WD40 repeat	332..369	CDD:293791	8/36 (22%)
		WD40 repeat	379..415	CDD:293791	11/41 (27%)
		WD40 repeat	422..447	CDD:293791	8/24 (33%)