DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sw and DNAI1

DIOPT Version :9

Sequence 1:NP_477075.2 Gene:sw / 44160 FlyBaseID:FBgn0003654 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001268357.1 Gene:DNAI1 / 27019 HGNCID:2954 Length:703 Species:Homo sapiens


Alignment Length:649 Identity:137/649 - (21%)
Similarity:256/649 - (39%) Gaps:142/649 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 DKDQRKDLDEMLSSLGVAPVSEVLSSLSSVNSMTSD----------NSNTQTPDASLQATVNGQS 101
            |:.:|:...:.|.::......|.:..:|...::..|          .|.|..|.|.....|..:.
Human   116 DEGRRQHYRDELVAVSYQGSQESVKVISETGNLEEDEEPKELETEPGSQTDVPAAGAAEKVTEEE 180

  Fly   102 -GGKKQP--------LNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLSCHSSPLSGYME 157
             ...|||        .|.|....|..|.|.::....|:....|:               .|....
Human   181 LMTPKQPKERKLTNQFNFSERASQTYNNPVRDRECQTEPPPRTN---------------FSATAN 230

  Fly   158 DWWRPRKAHATDYYDEYNLNPGLEWEDEFTDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAP 222
            .|         :.||.|        .:|....|::                         |:...
Human   231 QW---------EIYDAY--------VEELEKQEKT-------------------------KEKEK 253

  Fly   223 AITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENV--DIYTDYIGGG 285
            |.||:..|......:::..:..:...:|.||:        |.:::||.:::|.  ||..|:....
Human   254 AKTPVAKKSGKMAMRKLTSMESQTDDLIKLSQ--------AAKIMERMVNQNTYDDIAQDFKYYD 310

  Fly   286 DSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVV---GSYHNNEESPNEPDGVV 347
            |:.:...::....|.|.:...|:  :|...:|::.|:..:.:|..   |||...::|    .|::
Human   311 DAADEYRDQVGTLLPLWKFQNDK--AKRLSVTALCWNPKYRDLFAVGYGSYDFMKQS----RGML 369

  Fly   348 MVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAA 412
            ::::.| ..|.||.:|...|.||.......:|.|:..|.|.|.:.:::.:.....|...:...:.
Human   370 LLYSLK-NPSFPEYMFSSNSGVMCLDIHVDHPYLVAVGHYDGNVAIYNLKKPHSQPSFCSSAKSG 433

  Fly   413 AHTHPVYCLQMVG---TQNAHNVISISSDGKLCSWSL--------DM--LSQPQDTLELQQRQSK 464
            .|:.||:.::...   .||. |..|:||||::.||:|        |:  |.....|.|:.:....
Human   434 KHSDPVWQVKWQKDDMDQNL-NFFSVSSDGRIVSWTLVKRKLVHIDVIKLKVEGSTTEVPEGLQL 497

  Fly   465 AIAITSMAFPAN-EINSL-VMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDF 527
            .......||..: ||:.: ::|:|:|.:|..|: ...|...:.|:.|...:..:|     .:|..
Human   498 HPVGCGTAFDFHKEIDYMFLVGTEEGKIYKCSK-SYSSQFLDTYDAHNMSVDTVS-----WNPYH 556

  Fly   528 GHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNL---- 588
            ..:|::.|.|||:|:|......|::.::.|| .|.||||:|....:||||...|:..:::|    
Human   557 TKVFMSCSSDWTVKIWDHTIKTPMFIYDLNS-AVGDVAWAPYSSTVFAAVTTDGKAHIFDLAINK 620

  Fly   589 -----NQDTEVPTASIVVAGAPALNRVSWTPSGL-H--VCIGDEAGKLYVYDVAENLAQPSRDE 644
                 ||    |.|:       ..||::.....| |  :.:||:.|.:....::.||.:..:::
Human   621 YEAICNQ----PVAA-------KKNRLTHVQFNLIHPIIIVGDDRGHIISLKLSPNLRKMPKEK 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swNP_477075.2 Dynein_IC2 107..135 CDD:402922 7/35 (20%)
WD40 316..632 CDD:421866 87/345 (25%)
WD40 repeat 316..365 CDD:293791 13/51 (25%)
WD40 repeat 371..409 CDD:293791 6/37 (16%)
WD40 repeat 418..457 CDD:293791 15/51 (29%)
WD40 repeat 469..555 CDD:293791 22/87 (25%)
WD40 repeat 561..599 CDD:293791 16/46 (35%)
WD40 repeat 607..633 CDD:293791 7/28 (25%)
DNAI1NP_001268357.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..174 5/29 (17%)
WD40 324..681 CDD:225201 93/376 (25%)
WD 1 324..374 12/55 (22%)
WD40 repeat 339..385 CDD:293791 12/50 (24%)
WD40 <357..615 CDD:295369 72/270 (27%)
WD 2 379..417 11/37 (30%)
WD40 repeat 391..428 CDD:293791 7/36 (19%)
WD 3 426..469 13/43 (30%)
WD40 repeat 439..496 CDD:293791 16/57 (28%)
WD 4 478..530 12/51 (24%)
WD40 repeat 504..541 CDD:293791 10/37 (27%)
WD 5 535..574 11/43 (26%)
WD40 repeat 547..584 CDD:293791 10/41 (24%)
WD 6 578..616 14/38 (37%)
WD40 repeat 589..616 CDD:293791 11/26 (42%)
WD 7 622..662 11/50 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.