DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and Pdzk1

DIOPT Version :10

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_113900.1 Gene:Pdzk1 / 65144 RGDID:70924 Length:523 Species:Rattus norvegicus


Alignment Length:290 Identity:71/290 - (24%)
Similarity:103/290 - (35%) Gaps:85/290 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KTCHIVKRPDFDGYGFNLHSEKVKPGQFIGKVDADSPAEAAGLKEGDRILEVNGVSIGSETHKQV 85
            :.|.:.|: :...|||.|..||...|..:..::..||||.|||.:|||:|.:|||.:..|.|.||
  Rat     8 RECKLSKK-EGQNYGFFLRIEKDTDGHLVRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQV 71

  Fly    86 VARIKAIANEVRLLLID-----------VDGKALEVKPASP------PAAACNGNGSASQNGYEG 133
            |..::...|.|.||::|           ||.|.|:..|..|      |....||       |.|.
  Rat    72 VDLVRKSGNSVTLLVLDGDSYEKAVKHQVDLKELDQSPREPALNEKKPDLGMNG-------GVET 129

  Fly   134 TKQE------MPGASANISSISMVSTKRSSNASSIQSGSTMNASDLDVVDRGIPAVAAPVAITPP 192
            ..|.      ..|.|...|            ..:||....:..:|                |||.
  Rat   130 CAQPRLCYLVKEGNSFGFS------------LKTIQGKKGVFLTD----------------ITPQ 166

  Fly   193 PVQNGSKPSSPINNNTLMSTPPPPSATKAGINNNGSVYNTNGNGTNGMTTPTTPPPPTSGYKAGT 257
            .|                       |.|||:..:..:...||......:........|   |:|:
  Rat   167 GV-----------------------AMKAGVLADDHLIEVNGENVENASHEEVVEKVT---KSGS 205

  Fly   258 LHLPMTAAEMRAKLASKKKYDPKNESVDLK 287
            ..:.:...:..|:..|::|...|.|:..||
  Rat   206 RIMFLLVDKETARCHSEQKTPFKRETASLK 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_NHERF-like 21..102 CDD:467249 32/80 (40%)
Pdzk1NP_113900.1 PDZ_NHERF-like 8..88 CDD:467249 32/80 (40%)
PDZ_NHERF-like 134..213 CDD:467249 19/132 (14%)
PDZ_NHERF-like 242..321 CDD:467249
PDZ_NHERF-like 377..456 CDD:467249
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..523
Blue background indicates that the domain is not in the aligned region.

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