DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and nherf4b

DIOPT Version :10

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_021331958.2 Gene:nherf4b / 566852 ZFINID:ZDB-GENE-081022-151 Length:530 Species:Danio rerio


Alignment Length:287 Identity:77/287 - (26%)
Similarity:107/287 - (37%) Gaps:89/287 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PTLP--------PGVTKTCHIVKRPDFDGYGFNLHSEKVKPGQ---FIGKVDADSPAEAAGLKEG 66
            |.||        |...:..|:|..|  |||||.|..||...|:   .:.:||..||||..|:|||
Zfish   247 PILPAMADAEKMPYRPQRLHLVMGP--DGYGFLLRQEKGGAGRTVHMVREVDKGSPAELGGVKEG 309

  Fly    67 DRILEVNGVSIGSETHKQVVARIKAIANEVR--------------------LLLIDVDGKALEV- 110
            :.:|||||.|....:|:.||:.|:....:|.                    |..:||.....|| 
Zfish   310 EMLLEVNGESTDPLSHEDVVSNIRQSGQQVTLTTMTPQGYDFYTKLGLSPLLFCVDVPSAIPEVK 374

  Fly   111 -------KPASPPA-----AACNGN--------GSASQNGYEGTKQEMPGASANISSISMVSTKR 155
                   |||.||.     ...|.|        |||....:.|..|:.||     :.||.|:...
Zfish   375 KEIPVTPKPAVPPVEPQEEVQINPNVRRCILERGSAGFGFHLGCVQQKPG-----TFISQVAAGG 434

  Fly   156 SSNASSIQSGST---MNASDL------DV---VDRGIPAVAAPVAITPPPVQNG----SKPSSPI 204
            ...:|.:..|..   :|..::      ||   |.||...::..|.     .|.|    .:...|:
Zfish   435 PGQSSGLFQGDVVVEVNGQNVEKESLEDVIMHVKRGGETLSLLVV-----DQKGYDWLKQNGKPV 494

  Fly   205 NNNTL---------MSTPPPPSATKAG 222
            ..|.|         :|:...|:..|.|
Zfish   495 TLNKLETISEVEESVSSSAEPARVKTG 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_NHERF-like 21..102 CDD:467249 34/103 (33%)
nherf4bXP_021331958.2 PDZ_NHERF-like 45..125 CDD:467249
PDZ_NHERF-like 155..234 CDD:467249
PDZ_NHERF-like 264..342 CDD:467249 33/79 (42%)
PDZ_NHERF-like 401..480 CDD:467249 19/88 (22%)
Blue background indicates that the domain is not in the aligned region.

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