DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and Tamalin

DIOPT Version :9

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_062391.3 Gene:Tamalin / 56149 MGIID:1860303 Length:392 Species:Mus musculus


Alignment Length:237 Identity:53/237 - (22%)
Similarity:94/237 - (39%) Gaps:51/237 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VKRPDFDGYGFNLHS--------EKVKPGQFIGKVDADSPAEAAGLKEGDRILEVNGVSIGSETH 82
            :::.|...:||.:.:        ::|:...|:.:|...|||:.|||..||.|..|||:::....|
Mouse   103 LEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGIRH 167

  Fly    83 KQVVARIKAIANEVRLLLI---DVDGKALEVKPASPPAAACNGNGSASQNGYEGTKQEMPGASAN 144
            :::|..|||..|.:||..:   .:....||.:                   .:..||.:......
Mouse   168 REIVDIIKASGNVLRLETLYGTSIRKAELEAR-------------------LQYLKQTLYEKWGE 213

  Fly   145 ISSISMVSTKRSSNASSIQSGSTMNASDLDVVDRGIPAVAAPVAITPPPVQNGSKPSSPINNNTL 209
            ..|: ||..:|..:...::..|..:..:      .:.:......:.|     ||.|..|     |
Mouse   214 YRSL-MVQEQRLVHGLVVKDPSIYDTLE------SVRSCLYGAGLLP-----GSLPFGP-----L 261

  Fly   210 MSTPPPP--SATKAGINNNGSVYNTNGNGTNGMTTPTTPPPP 249
            ::.|...  .|.:|..:.:.:||:|...|  |......||||
Mouse   262 LAAPGSARGGARRAKGDTDDAVYHTCFFG--GAEPQALPPPP 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 26/82 (32%)
TamalinNP_062391.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50
PDZ_signaling 99..184 CDD:238492 25/80 (31%)
Interaction with PSCD3. /evidence=ECO:0000269|PubMed:10828067 180..257 14/107 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..315 4/8 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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