DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and grid2ipb

DIOPT Version :9

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_009304908.1 Gene:grid2ipb / 559717 ZFINID:ZDB-GENE-040724-161 Length:1383 Species:Danio rerio


Alignment Length:94 Identity:30/94 - (31%)
Similarity:50/94 - (53%) Gaps:19/94 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YGFNLHS------EKVKPGQFIGKVDADSPAEAAGLKEGDRILEVNGVSIGSETHKQVVARIKAI 92
            :||.|..      :.|.||         |||||.|||.|||||.:||:.:.:.:|::||:.::. 
Zfish   346 FGFTLRGHAPVWIDSVMPG---------SPAEACGLKTGDRILFLNGLDMRNCSHEKVVSMLQG- 400

  Fly    93 ANEVRLLLID---VDGKALEVKPASPPAA 118
            :..:..|:::   ||....:.:|...|:|
Zfish   401 SGAMPSLVVEEGPVDYPQSDSEPEETPSA 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 25/72 (35%)
grid2ipbXP_009304908.1 PDZ_signaling 9..69 CDD:238492
PDZ_signaling 80..156 CDD:238492
HN_L-delphilin-R1_like 183..262 CDD:259820
PDZ_signaling 335..410 CDD:238492 25/73 (34%)
HN_L-delphilin-R2_like 451..530 CDD:259821
FH2 995..1360 CDD:280362
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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