DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and nherf1a

DIOPT Version :10

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_997872.2 Gene:nherf1a / 327272 ZFINID:ZDB-GENE-031006-7 Length:384 Species:Danio rerio


Alignment Length:257 Identity:79/257 - (30%)
Similarity:113/257 - (43%) Gaps:59/257 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TPTSPKTPTPPT-------------------LPPGVTKTCHIVKRPDFDGYGFNLHSEKVKPGQF 48
            |.:...||.|.|                   |.|   :.|||.|  ...|||||||:||.||||:
Zfish   126 TSSRESTPVPETNGDMRIDRLSVSSKDSKNELRP---RLCHIKK--GATGYGFNLHTEKTKPGQY 185

  Fly    49 IGKVDADSPAEAAGLKEGDRILEVNGVSIGSETHKQVVARIKAIANEVRLLLIDVDGKAL----E 109
            |..||.|||||.:||:..|:|::|||:|:.:..|.:|||.|||..:|.:||::|.:..|.    |
Zfish   186 IRAVDEDSPAEKSGLRPQDKIVQVNGISVHTMQHSEVVAAIKAGGDETKLLVVDPEADAFFMSCE 250

  Fly   110 VKPASP------PAAACNGNGSASQNGYEGTKQEMPGASANISSISMVSTKRSSNASSIQSGSTM 168
            :.|...      |............|| :..::|.|....::||.|     .|||.|:..:.:..
Zfish   251 ILPTEEHLTGPLPEPIPRREAEEQVNG-KVVQEEKPKVEMSLSSSS-----TSSNTSTSAAPAPA 309

  Fly   169 NASDLDVVDRGIPAVA-APVAITPPPVQNGSKPSSPINNNTLMSTPPPPSATKAGINNNGSV 229
            :|          ||.| ||...:.|.....:.|...:....        |:..||:..|.|:
Zfish   310 SA----------PAPASAPAPASAPAPAMAAAPQEKVKEKA--------SSADAGLALNMSL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_NHERF-like 21..102 CDD:467249 43/80 (54%)
nherf1aNP_997872.2 PDZ_NHERF-like 8..86 CDD:467249
PDZ_NHERF-like 160..239 CDD:467249 43/80 (54%)
EBP50_C 242..384 CDD:462654 28/136 (21%)
Blue background indicates that the domain is not in the aligned region.

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