DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and Stxbp4

DIOPT Version :9

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_006247190.1 Gene:Stxbp4 / 303443 RGDID:1307903 Length:557 Species:Rattus norvegicus


Alignment Length:176 Identity:39/176 - (22%)
Similarity:66/176 - (37%) Gaps:42/176 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LKEGDRILEVN-----GVSIGSETHKQVVARIKAIANEVRLLLIDVDGKALEVKPA-----SPPA 117
            ||.||:::.:|     |||.  |..|.::.|.| :..|..|.:..:..|:....|.     |||.
  Rat    64 LKPGDQLVSINKESMIGVSF--EEAKNILTRAK-LRWESPLEIAFIRQKSYCGHPGNICCQSPPV 125

  Fly   118 AA-CNGNGSASQ--NGYEGTKQEMPGASAN-------ISSISMVSTKRSSNASSIQSGSTMNASD 172
            :. |....||..  :...||.  :|..|:.       :.|.:::.|:...:.:.:....::|   
  Rat   126 SEDCEPQTSAFNLLSSPAGTL--LPKTSSTPRTQDSILPSCTVIQTQPEHSQAGLAPVPSLN--- 185

  Fly   173 LDVVDRGIPAVAAPVAITPPPVQNGSKPSSPINNNTLMSTPPPPSA 218
                  ..|...:...|.|....:.|.|...|:.|        |||
  Rat   186 ------NRPTDTSNADIAPAWTDDASGPQGKISLN--------PSA 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 14/42 (33%)
Stxbp4XP_006247190.1 PDZ_signaling 21..94 CDD:238492 11/31 (35%)
TPR_MLP1_2 299..400 CDD:285204
GBP_C <306..389 CDD:303769
coiled coil 359..369 CDD:293879
coiled coil 378..389 CDD:293879
WW 502..531 CDD:278809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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