DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10939 and Pdzd11

DIOPT Version :9

Sequence 1:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_038955522.1 Gene:Pdzd11 / 302422 RGDID:1560007 Length:145 Species:Rattus norvegicus


Alignment Length:112 Identity:33/112 - (29%)
Similarity:44/112 - (39%) Gaps:20/112 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PKTPTPPTLPPGVTKTCH---------------IVKRPDFDGYGFNLHSEKVKP-GQFIGKVDAD 55
            |....||...|...:..|               .:|:|.....|||:...|... |.||.||..|
  Rat    16 PAYENPPAWIPPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPD 80

  Fly    56 SPAEAAGLKEGDRILEVNGVSIGSETHKQV----VARIKAIANEVRL 98
            |.|..|||:|||::|.||.|......|.::    ...|...|.|:.:
  Rat    81 SDAHRAGLQEGDQVLAVNDVDFQDIEHSKLCVFQAVEILKTAREISM 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 29/99 (29%)
Pdzd11XP_038955522.1 PDZ_signaling 45..130 CDD:238492 28/83 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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